Docker-compose slow, crashes app, unusable in beta13

Expected behavior

I have an app in two containers, a Rails app in one container and a Postgres database in another. I run them in docker-compose. I also have browsersync running as part of my gulp setup and refreshing the page as I make changes, though the crashing happens whether I use the gulp proxy or not. The beta12 I installed on Monday ran them with no issues.

Actual behavior

Under beta13, the app runs very slowly and crashes often. It’s not just the app though; the Docker daemon crashes and kills both containers, and I have to docker-compose up again to start them.

Information

$ pinata diagnose -u
OS X: version 10.11.5 (build: 15F34)
Docker.app: version v1.11.1-beta13
Running diagnostic tests:
[OK]      Moby booted
[OK]      driver.amd64-linux
[OK]      vmnetd
[OK]      osxfs
[OK]      db
[OK]      slirp
[OK]      menubar
[OK]      environment
[OK]      Docker
[OK]      VT-x
Docker logs are being collected into /tmp/20160526-121823.tar.gz
Most specific failure is: No error was detected
Your unique id is: 6F8334E6-2BF2-4163-8435-8DC7508A0941

Running OSX 10.11.5.

Steps to reproduce the behavior

  1. docker-compose up -d
  2. Use the app normally.
  3. After a few very slow pageviews, app crashes

Things I tried

  • Stopping Docker and restarting
  • Restarting computer
  • Uninstalling Docker and reinstalling from scratch

Also, here is a dump from the Docker logs:

5/26/16 12:13:16.870 PM Docker[5313]: Creating resource Entry(5cf866e1e19d7c3166e9101c17697b1c3811c1e34a9f877ce6a7b55633d6f603)
5/26/16 12:13:16.872 PM Docker[5313]: Write offset=0 data=[5cf866e1e19d7c3166e9101c17697b1c3811c1e34a9f877ce6a7b55633d6f603:/Users/davidham/Sites/PharmaStart/app] to file
5/26/16 12:13:16.872 PM Docker[5313]: Volume.start 5cf866e1e19d7c3166e9101c17697b1c3811c1e34a9f877ce6a7b55633d6f603 (paths = [/Users/davidham/Sites/PharmaStart/app])
5/26/16 12:13:16.876 PM Docker[5313]: Created instance 5cf866e1e19d7c3166e9101c17697b1c3811c1e34a9f877ce6a7b55633d6f603
5/26/16 12:13:16.913 PM Docker[5314]: Creating resource Entry(tcp:0.0.0.0:443:tcp:172.17.0.3:3000)
5/26/16 12:13:16.916 PM Docker[5314]: Write offset=0 data=[tcp:0.0.0.0:443:tcp:172.17.0.3:3000] to file
5/26/16 12:13:16.923 PM Docker[5558]: Client reports version 1, commit 0123456789012345678901234567890123456789
5/26/16 12:13:16.923 PM Docker[5314]: Client.negotiate: received ((magic VMN3T)(version 15)(commit 16dbe555c7dd4304521b21e8286d83fe4864c15c))
5/26/16 12:13:16.923 PM Docker[5558]: sendmsg ok
5/26/16 12:13:16.924 PM Docker[5314]: Created instance tcp:0.0.0.0:443:tcp:172.17.0.3:3000
5/26/16 12:16:21.501 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:21.501 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:21.927 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:21.927 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:24.520 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:24.520 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:24.663 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:24.663 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:24.866 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:24.866 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:25.631 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:25.631 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:25.776 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:25.776 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:26.094 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:26.095 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:26.523 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:26.523 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:48.467 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:48.467 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:50.912 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:50.912 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:51.346 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:51.346 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:51.850 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:51.850 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:16:51.938 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:16:51.938 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy b: write failed with Eof
5/26/16 12:17:08.287 PM Docker[5313]: Unknown exception caught: End_of_file
5/26/16 12:17:08.287 PM Docker[5313]: Fatal unexpected exception: End_of_file
5/26/16 12:17:08.292 PM Docker[5310]: Reap com.docker.osxfs (pid 5313): exit status 1
5/26/16 12:17:08.431 PM Docker[5314]: Socket.TCPV4.write tcp:0.0.0.0:443:tcp:172.17.0.3:3000: caught Unix.Unix_error(Unix.EPIPE, "write", "") returning Eof
5/26/16 12:17:08.431 PM Docker[5314]: tcp:0.0.0.0:443:tcp:172.17.0.3:3000 proxy failed with flow proxy a: write failed with Eof
5/26/16 12:17:09.296 PM Docker[5310]: Stop 1 children with order 1: com.docker.driver.amd64-linux (pid 5316)
5/26/16 12:17:09.296 PM Docker[5310]: Signal terminated to com.docker.driver.amd64-linux (pid 5316)
5/26/16 12:17:09.306 PM Docker[5316]: sending SIGTERM to com.docker.hyperkit pid 5319
5/26/16 12:17:15.339 PM Docker[5316]: virtio-net-ipc: initialising uuid=444d6909-97a3-41db-89ea-73740d880d86,path=/Users/davidham/Library/Containers/com.docker.docker/Data/s50,macfile=/Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/mac.0
5/26/16 12:17:15.340 PM Docker[5316]: Interface will have uuid 444d6909-97a3-41db-89ea-73740d880d86
5/26/16 12:17:15.340 PM Docker[5316]: Connection established with MAC=c0:ff:ee:c0:ff:ee and MTU 1500
5/26/16 12:17:15.340 PM Docker[5316]: virtio-9p: initialising path=/Users/davidham/Library/Containers/com.docker.docker/Data/s40,tag=db
5/26/16 12:17:15.340 PM Docker[5316]: virtio-9p: initialising path=/Users/davidham/Library/Containers/com.docker.docker/Data/s51,tag=port
5/26/16 12:17:15.340 PM Docker[5316]: linkname /Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/tty
5/26/16 12:17:15.340 PM Docker[5316]: COM1 connected to /dev/ttys000
5/26/16 12:17:15.340 PM Docker[5316]: COM1 linked to /Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/tty
5/26/16 12:17:15.358 PM Docker[5314]: PPP.listen: closing connection
5/26/16 12:17:15.377 PM Docker[5315]: VM has shutdown at 2016-05-26 12:17:15 -0500 CDT
5/26/16 12:17:15.380 PM Docker[5310]: Reap com.docker.driver.amd64-linux (pid 5316): exit status 0
5/26/16 12:17:15.404 PM Docker[5280]: dockerState = starting
5/26/16 12:17:15.407 PM Docker[5310]: Stop 2 children with order 2: com.docker.osxfs (pid 5313), com.docker.slirp (pid 5314)
5/26/16 12:17:15.407 PM Docker[5310]: Signal terminated to com.docker.slirp (pid 5314)
5/26/16 12:17:15.411 PM Docker[5310]: Reap com.docker.slirp (pid 5314): signal: terminated
5/26/16 12:17:15.513 PM Docker[5310]: Starting com.docker.osxfs, com.docker.slirp, com.docker.driver.amd64-linux
5/26/16 12:17:15.515 PM Docker[5310]: Start com.docker.osxfs (pid 5705)
5/26/16 12:17:15.518 PM Docker[5310]: Start com.docker.slirp (pid 5706)
5/26/16 12:17:15.521 PM Docker[5310]: Start com.docker.driver.amd64-linux (pid 5707)
5/26/16 12:17:15.541 PM Docker[5707]: Acquired hypervisor lock
5/26/16 12:17:15.544 PM Docker[5707]: Docker is not responding: waiting 0.5s
5/26/16 12:17:15.545 PM Docker[5705]: Logging to Apple System Log
5/26/16 12:17:15.548 PM Docker[5706]: Logging to Apple System Log
5/26/16 12:17:15.548 PM Docker[5706]: Setting handler to ignore all SIGPIPE signals
5/26/16 12:17:15.548 PM Docker[5706]: starting port_forwarding port_control_path:fd:4 vsock_path:/Users/davidham/Library/Containers/com.docker.docker/Data/@connect
5/26/16 12:17:15.548 PM Docker[5706]: attempting to reconnect to database on unix /Users/davidham/Library/Containers/com.docker.docker/Data/s40
5/26/16 12:17:15.550 PM Docker[5706]: reconnected transport layer
5/26/16 12:17:15.551 PM Docker[5706]: allowing binds to any IP addresses
5/26/16 12:17:15.554 PM Docker[5706]: Creating slirp server pcap_settings:disabled peer_ip:192.168.65.2 local_ip:192.168.65.1
5/26/16 12:17:15.618 PM Docker[5707]: hypervisor: native
5/26/16 12:17:15.618 PM Docker[5707]: filesystem: osxfs
5/26/16 12:17:15.619 PM Docker[5705]: Using protocol TwoThousand msize 16384
5/26/16 12:17:15.620 PM Docker[5707]: Hypervisor: native; BootProtocol: direct; UefiBootDisk: /Users/davidham/UefiBoot.qcow2
5/26/16 12:17:15.620 PM Docker[5707]: Launching: /Applications/Docker.app/Contents/MacOS/com.docker.hyperkit -A -m 2G -c 2 -u -s 0:0,hostbridge -s 31,lpc -s 2:0,virtio-ipc,uuid=444d6909-97a3-41db-89ea-73740d880d86,path=/Users/davidham/Library/Containers/com.docker.docker/Data/s50,macfile=/Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/mac.0 -s 3,virtio-blk,file:///Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/Docker.qcow2,format=qcow -s 4,virtio-9p,path=/Users/davidham/Library/Containers/com.docker.docker/Data/s40,tag=db -s 5,virtio-rnd -s 6,virtio-9p,path=/Users/davidham/Library/Containers/com.docker.docker/Data/s51,tag=port -s 7,virtio-sock,guest_cid=3,path=/Users/davidham/Library/Containers/com.docker.docker/Data,guest_forwards=2376;1525 -l com1,autopty=/Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/tty,log=/Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/console-ring -f kexec,/Applications/Docker.app/Contents/Resources/moby/vmlinuz64,/Applications/Docker.app/Contents/Resources/moby/initrd.img,earlyprintk=serial console=ttyS0 com.docker.driverDir="/Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux", com.docker.database="com.docker.driver.amd64-linux" -F /Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/hypervisor.pid
5/26/16 12:17:15.647 PM Docker[5709]: Starting hyperkit
5/26/16 12:17:15.647 PM Docker[5707]: May 26 12:17:15  Docker[5709] <Notice>: Starting hyperkit
5/26/16 12:17:15.647 PM Docker[5706]: PPP.negotiate: received ((magic VMN3T)(version 15)(commit 16dbe555c7dd4304521b21e8286d83fe4864c15c))
5/26/16 12:17:15.647 PM Docker[5706]: PPP.negotiate: received (Ethernet 444d6909-97a3-41db-89ea-73740d880d86)
5/26/16 12:17:15.647 PM Docker[5706]: PPP.negotiate: sending ((mtu 1500)(max_packet_size 1550)(client_macaddr c0:ff:ee:c0:ff:ee))
5/26/16 12:17:15.648 PM Docker[5707]: mirage_block_open file:///Users/davidham/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/Docker.qcow2 buffered = true
5/26/16 12:17:15.648 PM Docker[5707]: mirage_block_open returning 0
5/26/16 12:17:15.648 PM Docker[5707]: mirage_block_stat
5/26/16 12:17:15.649 PM Docker[5707]: vsock init 7:0 = /Users/davidham/Library/Containers/com.docker.docker/Data, guest_cid = 3
5/26/16 12:17:15.649 PM Docker[5706]: PPP.listen: called a second time: doing nothing
5/26/16 12:17:15.649 PM Docker[5706]: TCP/IP ready
5/26/16 12:17:17.458 PM Docker[5707]: 
rdmsr to register 0x34 on vcpu 1
5/26/16 12:17:17.545 PM Docker[5707]: Docker is not responding: waiting 0.5s
5/26/16 12:17:18.049 PM Docker[5707]: Docker is not responding: waiting 0.5s
5/26/16 12:17:18.554 PM Docker[5707]: Docker is not responding: waiting 0.5s
5/26/16 12:17:19.056 PM Docker[5707]: Docker is not responding: waiting 0.5s
5/26/16 12:17:19.558 PM Docker[5707]: Docker is not responding: waiting 0.5s
5/26/16 12:17:20.050 PM Docker[5705]: transfused: mount 
5/26/16 12:17:20.051 PM Docker[5705]: transfused: /bin/fusermount 
5/26/16 12:17:20.051 PM Docker[5705]: transfused: -o 
5/26/16 12:17:20.051 PM Docker[5705]: transfused: allow_other,max_read=1048576,subtype=osxfs 
5/26/16 12:17:20.051 PM Docker[5705]: transfused: /Mac 
5/26/16 12:17:20.051 PM Docker[5705]: transfused: 
5/26/16 12:17:20.052 PM Docker[5705]: osxfs tracing: OFF 
5/26/16 12:17:20.060 PM Docker[5707]: Docker is not responding: waiting 0.5s
5/26/16 12:17:20.060 PM Docker[5706]: Using protocol TwoThousand msize 8192
5/26/16 12:17:21.791 PM Docker[5707]: Docker is responding
5/26/16 12:17:21.803 PM Docker[5315]: VM has started at 2016-05-26 12:17:21 -0500 CDT
5/26/16 12:17:21.859 PM Docker[5280]: dockerState = running
5/26/16 12:18:23.914 PM Docker[5756]: EOF reading packet from Unix domain socket: closing
5/26/16 12:18:23.915 PM Docker[5756]: Failed to read hello from client
5/26/16 12:18:23.916 PM Docker[5706]: server loop caught Failure("Caught EOF on underlying FLOW"): no further requests will be processed

Hi,

Same issue there, with docker-compose and rails app.

This is logs when crashing

May 27 11:18:18 android-f729a1a2b75be60b Docker[4339] <Error>: recvfrom failed with Lwt.Canceled
May 27 11:18:18 android-f729a1a2b75be60b Docker[4339] <Error>: DNS response timed out after 5s
May 27 11:22:13 android-f729a1a2b75be60b Docker[4338] <Error>: Unknown exception caught: End_of_file
May 27 11:22:13 android-f729a1a2b75be60b Docker[4338] <Error>: Fatal unexpected exception: End_of_file
May 27 11:22:13 android-f729a1a2b75be60b Docker[4335] <Notice>: Reap com.docker.osxfs (pid 4338): exit status 1
May 27 11:22:14 android-f729a1a2b75be60b Docker[4335] <Notice>: Stop 1 children with order 1: com.docker.driver.amd64-linux (pid 4341)
May 27 11:22:14 android-f729a1a2b75be60b Docker[4335] <Notice>: Signal terminated to com.docker.driver.amd64-linux (pid 4341)
May 27 11:22:14 android-f729a1a2b75be60b Docker[4341] <Notice>: sending SIGTERM to com.docker.hyperkit pid 4344
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: virtio-net-ipc: initialising uuid=9165ba41-14ce-4de0-b4f2-b1437e3be6cc,path=/var/tmp/com.docker.vmnetd.socket,macfile=/Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/mac.0
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: Interface will have uuid 9165ba41-14ce-4de0-b4f2-b1437e3be6cc
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: Connection established with MAC=6e:02:5d:7d:cf:32 and MTU 1500
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: virtio-net-ipc: initialising uuid=65eadca0-5e7e-4ff5-a2b1-8b91759a1724,path=/Users/mickael/Library/Containers/com.docker.docker/Data/s50,macfile=/Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/mac.1
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: Interface will have uuid 65eadca0-5e7e-4ff5-a2b1-8b91759a1724
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: Connection established with MAC=c0:ff:ee:c0:ff:ee and MTU 1500
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: virtio-9p: initialising path=/Users/mickael/Library/Containers/com.docker.docker/Data/s40,tag=db
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: virtio-9p: initialising path=/Users/mickael/Library/Containers/com.docker.docker/Data/s51,tag=port
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: linkname /Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/tty
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: COM1 connected to /dev/ttys000
May 27 11:22:19 android-f729a1a2b75be60b Docker[4341] <Notice>: COM1 linked to /Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/tty
May 27 11:22:19 android-f729a1a2b75be60b Docker[4339] <Notice>: PPP.listen: closing connection
May 27 11:22:19 android-f729a1a2b75be60b Docker[4345] <Notice>: EOF reading packet from Unix domain socket: closing
May 27 11:22:19 android-f729a1a2b75be60b Docker[4345] <Error>: Failed to read header
May 27 11:22:19 android-f729a1a2b75be60b Docker[4345] <Notice>: Stopping vmnet interface
May 27 11:22:19 android-f729a1a2b75be60b Docker[4340] <Notice>: VM has shutdown at 2016-05-27 11:22:19 +0200 CEST
May 27 11:22:19 android-f729a1a2b75be60b Docker[4335] <Notice>: Reap com.docker.driver.amd64-linux (pid 4341): exit status 0
May 27 11:22:19 android-f729a1a2b75be60b Docker[4345] <Notice>: Vmnet interface stopped
May 27 11:22:19 android-f729a1a2b75be60b Docker[4345] <Notice>: Vmnet shutdown done
May 27 11:22:19 android-f729a1a2b75be60b Docker[4322] <Notice>: dockerState = starting
May 27 11:22:19 android-f729a1a2b75be60b Docker[4335] <Notice>: Stop 2 children with order 2: com.docker.osxfs (pid 4338), com.docker.slirp (pid 4339)
May 27 11:22:19 android-f729a1a2b75be60b Docker[4335] <Notice>: Signal terminated to com.docker.slirp (pid 4339)
May 27 11:22:19 android-f729a1a2b75be60b Docker[4335] <Notice>: Reap com.docker.slirp (pid 4339): signal: terminated
May 27 11:22:19 android-f729a1a2b75be60b Docker[4335] <Notice>: Starting com.docker.osxfs, com.docker.slirp, com.docker.driver.amd64-linux
May 27 11:22:19 android-f729a1a2b75be60b Docker[4335] <Notice>: Start com.docker.osxfs (pid 4429)
May 27 11:22:19 android-f729a1a2b75be60b Docker[4335] <Notice>: Start com.docker.slirp (pid 4430)
May 27 11:22:19 android-f729a1a2b75be60b Docker[4335] <Notice>: Start com.docker.driver.amd64-linux (pid 4431)
May 27 11:22:19 android-f729a1a2b75be60b Docker[4429] <Notice>: Logging to Apple System Log
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: Logging to Apple System Log
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: Setting handler to ignore all SIGPIPE signals
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: starting port_forwarding port_control_path:fd:4 vsock_path:/Users/mickael/Library/Containers/com.docker.docker/Data/@connect
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: attempting to reconnect to database on unix /Users/mickael/Library/Containers/com.docker.docker/Data/s40
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: reconnected transport layer
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: allowing binds to any IP addresses
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: Creating slirp server pcap_settings:disabled peer_ip:192.168.65.2 local_ip:192.168.65.1
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: Acquired hypervisor lock
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: Docker is not responding: waiting 0.5s
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: hypervisor: native
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: filesystem: osxfs
May 27 11:22:19 android-f729a1a2b75be60b Docker[4429] <Notice>: Using protocol TwoThousand msize 16384
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: Hypervisor: native; BootProtocol: direct; UefiBootDisk: /Users/mickael/UefiBoot.qcow2
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: Launching: /Applications/Docker.app/Contents/MacOS/com.docker.hyperkit -A -m 4G -c 4 -u -s 0:0,hostbridge -s 31,lpc -s 2:0,virtio-ipc,uuid=9165ba41-14ce-4de0-b4f2-b1437e3be6cc,path=/var/tmp/com.docker.vmnetd.socket,macfile=/Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/mac.0 -s 3:0,virtio-ipc,uuid=65eadca0-5e7e-4ff5-a2b1-8b91759a1724,path=/Users/mickael/Library/Containers/com.docker.docker/Data/s50,macfile=/Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/mac.1 -s 4,virtio-blk,file:///Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/Docker.qcow2,format=qcow -s 5,virtio-9p,path=/Users/mickael/Library/Containers/com.docker.docker/Data/s40,tag=db -s 6,virtio-rnd -s 7,virtio-9p,path=/Users/mickael/Library/Containers/com.docker.docker/Data/s51,tag=port -s 8,virtio-sock,guest_cid=3,path=/Users/mickael/Library/Containers/com.docker.docker/Data,guest_forwards=2376;1525 -l com1,autopty=/Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/tty,log=/Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/console-ring -f kexec,/Applications/Docker.app/Contents/Resources/moby/vmlinuz64,/Applications/Docker.app/Contents/Resources/moby/initrd.img,earlyprintk=serial console=ttyS0 com.docker.driverDir="/Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux", com.docker.database="com.docker.driver.amd64-linux" -F /Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/hypervisor.pid
May 27 11:22:19 android-f729a1a2b75be60b Docker[4433] <Notice>: Starting hyperkit
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: May 27 11:22:19  Docker[4433] <Notice>: Starting hyperkit
May 27 11:22:19 android-f729a1a2b75be60b Docker[4434] <Notice>: Client reports version 15, commit 16dbe555c7dd4304521b21e8286d83fe4864c15c
May 27 11:22:19 android-f729a1a2b75be60b Docker[4434] <Notice>: com.docker.vmnetd reports MAC address: 6e:02:5d:7d:cf:32
May 27 11:22:19 android-f729a1a2b75be60b Docker[4434] <Notice>: rx batching enabled (len=64)
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: PPP.negotiate: received ((magic VMN3T)(version 15)(commit 16dbe555c7dd4304521b21e8286d83fe4864c15c))
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: PPP.negotiate: received (Ethernet 65eadca0-5e7e-4ff5-a2b1-8b91759a1724)
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: PPP.negotiate: sending ((mtu 1500)(max_packet_size 1550)(client_macaddr c0:ff:ee:c0:ff:ee))
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: PPP.listen: called a second time: doing nothing
May 27 11:22:19 android-f729a1a2b75be60b Docker[4430] <Notice>: TCP/IP ready
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: mirage_block_open file:///Users/mickael/Library/Containers/com.docker.docker/Data/com.docker.driver.amd64-linux/Docker.qcow2 buffered = true
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: mirage_block_open returning 0
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: mirage_block_stat
May 27 11:22:19 android-f729a1a2b75be60b Docker[4431] <Notice>: vsock init 8:0 = /Users/mickael/Library/Containers/com.docker.docker/Data, guest_cid = 3
May 27 11:22:22 android-f729a1a2b75be60b Docker[4431] <Notice>:
	rdmsr to register 0x34 on vcpu 3
May 27 11:22:22 android-f729a1a2b75be60b Docker[4431] <Notice>: Docker is not responding: waiting 0.5s
--- last message repeated 7 times ---
May 27 11:22:26 android-f729a1a2b75be60b Docker[4429] <Error>: transfused: mount
May 27 11:22:26 android-f729a1a2b75be60b Docker[4429] <Error>: transfused: /bin/fusermount
May 27 11:22:26 android-f729a1a2b75be60b Docker[4429] <Error>: transfused: -o
May 27 11:22:26 android-f729a1a2b75be60b Docker[4429] <Error>: transfused: allow_other,max_read=1048576,subtype=osxfs
May 27 11:22:26 android-f729a1a2b75be60b Docker[4429] <Error>: transfused: /Mac
May 27 11:22:26 android-f729a1a2b75be60b Docker[4429] <Error>: transfused:
May 27 11:22:26 android-f729a1a2b75be60b Docker[4429] <Notice>: osxfs tracing: OFF
May 27 11:22:26 android-f729a1a2b75be60b Docker[4430] <Notice>: Using protocol TwoThousand msize 8192
May 27 11:22:28 android-f729a1a2b75be60b Docker[4431] <Notice>: Docker is responding
May 27 11:22:28 android-f729a1a2b75be60b Docker[4340] <Notice>: VM has started at 2016-05-27 11:22:28 +0200 CEST
May 27 11:22:28 android-f729a1a2b75be60b Docker[4322] <Notice>: dockerState = running

I was only able to resolve this by downgrading to beta12.

Docker team, whatever you did in the 13.1 hotfix seems to have solved the issue. It’s noticeably faster than beta 12 too, nice work!