Hi all, first i have build my base and running container, when i run container ,im running python scripts it will generate sql files files ,but while running dbt im not able to run generated sql files
Sorry, but there is nothing in your question that we can work with. You will need to share more details. I can’t even ask for a specific detail as I really don’t understand the question. Why do you think it is a Docker issue?
Above image is my folder structure.
i had build image where i copy root folder to docker image ,started all my services. Im calling one python file target table processing in airflow dag ,it will generated sql files with sql in it,when i run dbt command its getting
PermissionError: [Errno 13] Permission denied: 'dbt run --models tables'
this is my docker yaml file
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
#
# Basic Airflow cluster configuration for CeleryExecutor with Redis and PostgreSQL.
#
# WARNING: This configuration is for local development. Do not use it in a production deployment.
#
# This configuration supports basic configuration using environment variables or an .env file
# The following variables are supported:
#
# AIRFLOW_IMAGE_NAME - Docker image name used to run Airflow.
# Default: apache/airflow:2.6.3
# AIRFLOW_UID - User ID in Airflow containers
# Default: 50000
# AIRFLOW_PROJ_DIR - Base path to which all the files will be volumed.
# Default: .
# Those configurations are useful mostly in case of standalone testing/running Airflow in test/try-out mode
#
# _AIRFLOW_WWW_USER_USERNAME - Username for the administrator account (if requested).
# Default: airflow
# _AIRFLOW_WWW_USER_PASSWORD - Password for the administrator account (if requested).
# Default: airflow
# _PIP_ADDITIONAL_REQUIREMENTS - Additional PIP requirements to add when starting all containers.
# Use this option ONLY for quick checks. Installing requirements at container
# startup is done EVERY TIME the service is started.
# A better way is to build a custom image or extend the official image
# as described in https://airflow.apache.org/docs/docker-stack/build.html.
# Default: ''
#
# Feel free to modify this file to suit your needs.
---
version: '3.8'
x-airflow-common:
&airflow-common
# In order to add custom dependencies or upgrade provider packages you can use your extended image.
# Comment the image line, place your Dockerfile in the directory where you placed the docker-compose.yaml
# and uncomment the "build" line below, Then run `docker-compose build` to build the images.
#image: Dockerfile
image: airflow_manomay
environment:
&airflow-common-env
POSTGRES_HOST_AUTH_METHOD : trust
AIRFLOW__CORE__EXECUTOR: CeleryExecutor
AIRFLOW__DATABASE__SQL_ALCHEMY_CONN: postgresql+psycopg2://airflow:airflow@postgres/airflow
# For backward compatibility, with Airflow <2.3
AIRFLOW__CORE__SQL_ALCHEMY_CONN: postgresql+psycopg2://airflow:airflow@postgres/airflow
AIRFLOW__CELERY__RESULT_BACKEND: db+postgresql://airflow:airflow@postgres/airflow
AIRFLOW__CELERY__BROKER_URL: redis://:@redis:6379/0
AIRFLOW__CORE__FERNET_KEY: ''
AIRFLOW__CORE__DAGS_ARE_PAUSED_AT_CREATION: 'true'
AIRFLOW__CORE__LOAD_EXAMPLES: 'false'
AIRFLOW__API__AUTH_BACKENDS: 'airflow.api.auth.backend.basic_auth,airflow.api.auth.backend.session'
# yamllint disable rule:line-length
# Use simple http server on scheduler for health checks
# See https://airflow.apache.org/docs/apache-airflow/stable/administration-and-deployment/logging-monitoring/check-health.html#scheduler-health-check-server
# yamllint enable rule:line-length
AIRFLOW__SCHEDULER__ENABLE_HEALTH_CHECK: 'true'
# WARNING: Use _PIP_ADDITIONAL_REQUIREMENTS option ONLY for a quick checks
# for other purpose (development, test and especially production usage) build/extend Airflow image.
_PIP_ADDITIONAL_REQUIREMENTS: ${_PIP_ADDITIONAL_REQUIREMENTS:-}
volumes:
- ${AIRFLOW_PROJ_DIR:-.}/dags:/opt/airflow/dags
- ${AIRFLOW_PROJ_DIR:-.}/dbt_folder:/opt/airflow/dbt_folder
- ${AIRFLOW_PROJ_DIR:-.}/logs:/opt/airflow/logs
- ${AIRFLOW_PROJ_DIR:-.}/config:/opt/airflow/config
- ${AIRFLOW_PROJ_DIR:-.}/plugins:/opt/airflow/plugins
- ${AIRFLOW_PROJ_DIR:-.}/helpers:/opt/airflow/helpers
- ${AIRFLOW_PROJ_DIR:-.}/profiles:/opt/airflow/profiles
user: "${AIRFLOW_UID:-50000}:0"
depends_on:
&airflow-common-depends-on
redis:
condition: service_healthy
postgres:
condition: service_healthy
services:
postgres:
image: postgres:13
environment:
POSTGRES_USER: airflow
POSTGRES_PASSWORD: airflow
POSTGRES_DB: airflow
pgbouncer:
"enabled: true"
volumes:
- postgres-db-volume:/var/lib/postgresql/data
healthcheck:
test: ["CMD", "pg_isready", "-U", "airflow"]
interval: 10s
retries: 5
start_period: 5s
restart: always
redis:
image: redis:latest
expose:
- 6379
healthcheck:
test: ["CMD", "redis-cli", "ping"]
interval: 10s
timeout: 30s
retries: 50
start_period: 30s
restart: always
airflow-webserver:
<<: *airflow-common
command: webserver
ports:
- "8080:8080"
healthcheck:
test: ["CMD", "curl", "--fail", "http://localhost:8080/health"]
interval: 30s
timeout: 10s
retries: 5
start_period: 30s
restart: always
depends_on:
<<: *airflow-common-depends-on
airflow-init:
condition: service_completed_successfully
airflow-scheduler:
<<: *airflow-common
command: scheduler
healthcheck:
test: ["CMD", "curl", "--fail", "http://localhost:8974/health"]
interval: 30s
timeout: 10s
retries: 5
start_period: 30s
restart: always
depends_on:
<<: *airflow-common-depends-on
airflow-init:
condition: service_completed_successfully
airflow-worker:
<<: *airflow-common
command: celery worker
healthcheck:
test:
- "CMD-SHELL"
- 'celery --app airflow.executors.celery_executor.app inspect ping -d "celery@$${HOSTNAME}"'
interval: 30s
timeout: 10s
retries: 5
start_period: 30s
environment:
<<: *airflow-common-env
# Required to handle warm shutdown of the celery workers properly
# See https://airflow.apache.org/docs/docker-stack/entrypoint.html#signal-propagation
DUMB_INIT_SETSID: "0"
restart: always
depends_on:
<<: *airflow-common-depends-on
airflow-init:
condition: service_completed_successfully
airflow-triggerer:
<<: *airflow-common
command: triggerer
healthcheck:
test: ["CMD-SHELL", 'airflow jobs check --job-type TriggererJob --hostname "$${HOSTNAME}"']
interval: 30s
timeout: 10s
retries: 5
start_period: 30s
restart: always
depends_on:
<<: *airflow-common-depends-on
airflow-init:
condition: service_completed_successfully
airflow-init:
<<: *airflow-common
entrypoint: /bin/bash
# yamllint disable rule:line-length
command:
- -c
- |
function ver() {
printf "%04d%04d%04d%04d" $${1//./ }
}
airflow_version=$$(AIRFLOW__LOGGING__LOGGING_LEVEL=INFO && gosu airflow airflow version)
airflow_version_comparable=$$(ver $${airflow_version})
min_airflow_version=2.2.0
min_airflow_version_comparable=$$(ver $${min_airflow_version})
if (( airflow_version_comparable < min_airflow_version_comparable )); then
echo
echo -e "\033[1;31mERROR!!!: Too old Airflow version $${airflow_version}!\e[0m"
echo "The minimum Airflow version supported: $${min_airflow_version}. Only use this or higher!"
echo
exit 1
fi
if [[ -z "${AIRFLOW_UID}" ]]; then
echo
echo -e "\033[1;33mWARNING!!!: AIRFLOW_UID not set!\e[0m"
echo "If you are on Linux, you SHOULD follow the instructions below to set "
echo "AIRFLOW_UID environment variable, otherwise files will be owned by root."
echo "For other operating systems you can get rid of the warning with manually created .env file:"
echo " See: https://airflow.apache.org/docs/apache-airflow/stable/howto/docker-compose/index.html#setting-the-right-airflow-user"
echo
fi
one_meg=1048576
mem_available=$$(($$(getconf _PHYS_PAGES) * $$(getconf PAGE_SIZE) / one_meg))
cpus_available=$$(grep -cE 'cpu[0-9]+' /proc/stat)
disk_available=$$(df / | tail -1 | awk '{print $$4}')
warning_resources="false"
if (( mem_available < 4000 )) ; then
echo
echo -e "\033[1;33mWARNING!!!: Not enough memory available for Docker.\e[0m"
echo "At least 4GB of memory required. You have $$(numfmt --to iec $$((mem_available * one_meg)))"
echo
warning_resources="true"
fi
if (( cpus_available < 2 )); then
echo
echo -e "\033[1;33mWARNING!!!: Not enough CPUS available for Docker.\e[0m"
echo "At least 2 CPUs recommended. You have $${cpus_available}"
echo
warning_resources="true"
fi
if (( disk_available < one_meg * 10 )); then
echo
echo -e "\033[1;33mWARNING!!!: Not enough Disk space available for Docker.\e[0m"
echo "At least 10 GBs recommended. You have $$(numfmt --to iec $$((disk_available * 1024 )))"
echo
warning_resources="true"
fi
if [[ $${warning_resources} == "true" ]]; then
echo
echo -e "\033[1;33mWARNING!!!: You have not enough resources to run Airflow (see above)!\e[0m"
echo "Please follow the instructions to increase amount of resources available:"
echo " https://airflow.apache.org/docs/apache-airflow/stable/howto/docker-compose/index.html#before-you-begin"
echo
fi
mkdir -p /sources/logs /sources/dags /sources/plugins
chown -R "${AIRFLOW_UID}:0" /sources/{logs,dags,plugins}
exec /entrypoint airflow version
# yamllint enable rule:line-length
environment:
<<: *airflow-common-env
_AIRFLOW_DB_UPGRADE: 'true'
_AIRFLOW_WWW_USER_CREATE: 'true'
_AIRFLOW_WWW_USER_USERNAME: ${_AIRFLOW_WWW_USER_USERNAME:-airflow}
_AIRFLOW_WWW_USER_PASSWORD: ${_AIRFLOW_WWW_USER_PASSWORD:-airflow}
_PIP_ADDITIONAL_REQUIREMENTS: ''
user: "0:0"
volumes:
- ${AIRFLOW_PROJ_DIR:-.}:/sources
airflow-cli:
<<: *airflow-common
profiles:
- debug
environment:
<<: *airflow-common-env
CONNECTION_CHECK_MAX_COUNT: "0"
# Workaround for entrypoint issue. See: https://github.com/apache/airflow/issues/16252
command:
- bash
- -c
- airflow
# You can enable flower by adding "--profile flower" option e.g. docker-compose --profile flower up
# or by explicitly targeted on the command line e.g. docker-compose up flower.
# See: https://docs.docker.com/compose/profiles/
flower:
<<: *airflow-common
command: celery flower
profiles:
- flower
ports:
- "5555:5555"
healthcheck:
test: ["CMD", "curl", "--fail", "http://localhost:5555/"]
interval: 30s
timeout: 10s
retries: 5
start_period: 30s
restart: always
depends_on:
<<: *airflow-common-depends-on
airflow-init:
condition: service_completed_successfully
volumes:
postgres-db-volume:Those are file system permissions. If it’s an executable, it must have the execution flag. If it reads files, it must be able to read those files. This appears to be a basic Linux filesytem problem that you just happen to experience in a container 
Please share your Dockerfile as well, and the output of stat ${AIRFLOW_PROJ_DIR:-.}/dbt_folder (of you will need to use the correct path, and not the placeholder!).
FROM apache/airflow:2.6.3-python3.10
RUN pip install --upgrade pip
# Install Airflow with extras
ARG AIRFLOW_VERSION=2.6.3
ENV AIRFLOW_HOME=/opt/airflow
COPY requirements.txt /tmp/
RUN pip install -r /tmp/requirements.txt
# Install other dependencies
WORKDIR /opt/airflow
RUN pip install airflow-provider-fivetran-async
# Create an admin user (replace <USERNAME> and <EMAIL> with your own values)
# Copy the DAGs folder
COPY . /opt/airflow
RUN export DBT_PROFILES_DIR=/opt/airflow/profiles
My dockerfile
This part as well, please, as it is high likely that the process inside the container has a different UID:GID than the owner of the folder.
You know that it does nothing, right? You already had a correct way to set an env variable before copying the requirements.txt. Exported variables in a RUN instruction will not be available in the final image.